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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925109.1_cds_XP_016473376.1_65512
CDS Infomation

[gene=LOC107795281] [db_xref=GeneID:107795281] [protein=probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1] [protein_id=XP_016473376.1] [location=join(11987..12173,12283..12419,14258..14353,15401..15520,17067..17156,17419..17601,17730..17885,18543..18692,18807..18908,19155..19264,19350..19468,19744..19835)] [gbkey=CDS]
Sequence

ATGGCGACTGACTCTCAAGCATACTTAGAAGGTGACAAGGTCAAAGACACCAAGTCCTTA
ATCGCCGAACTGTGCCGTCATTTCTACAACCAGGGATGGGTTGGGGGCACCGGCGGCAGC
ATCACCATTAAAGTCCATGATGAATCTATTCCCAAACCCCAACAACTTATCGTCATGTCC
CCTTCCGGGGTGCAAAAGGAAAGGATGGTAGAAGAGGACATGTATGTGATGTCATCAGAT
GGGTCTATTTTAACTGCGCCGGTGGCTAAACCTCCCCCGCACAAATTTCCCAAGTGTTCT
GATTGTGCTCCTCTTTTTATGAAGGCATATGAGATGCGTAATGCTGGTGCCGTTATCCAC
AGTCATGGAATGGAATCCTGCCTTGTAACAATGCTTAATCCACTAGCAAAAGAATTTCGG
ATCACTCATATGGAAATGATAAAAGGAATTCAAGGGCATGGTTACTATGACGAACTTGTG
GTTCCTATCATAGAAAACACTGCATATGAGAGAGAACTCACAGAATCTCTTGCTGAAGCT
ATCAAAGCTTACCCAAAAACAACAGCTGTGCTGGTCCGCAACCATGGTATATATGTGTGG
GGAGATTCTTGGATCAGTGCTAAAACACAGGCTGAGTGCTACCACTACCTCTTTGATGCT
GCAATTAAACTTCATCAATTAGGACTTGACTGGACAACACCAGCTCATGGTCCCATTCAT
AACCCCAATGGTCATTTTGATGGCATCCAGAATGCCAAAATATCTGCAAAAGAAGGTACT
CTTGCTTCAAATGGCAGCATTAAATCATCAAGGCGGTGCATCGTTTTGGATATAGAAGGA
ACCACTACCCCAATAACATTTGTTACTGATGTTCTGTTCCCTTATGCACGTGATAATGTG
GGGAGACACTTGGATGCTACATATGGCTCAGCAGAAACTCAACAGGATATTAAGTTATTA
CGTGCTCAAGTGCAGCAAGACCTAGAAAATGGTGTTGCTGGTGCTGTGCATATCCCGTCT
GATGATGCTGGGAAGATGGAGGTAACTGAAGCTTTGGTTGCTAATGTAGAGGCAATGATT
AAAGCTGACCGAAAGATTACTGCATTGAAAGAGTTACAGGGACATATATGGCAAACTGGG
TTTGAGAATAATGAGTTAGAGGGACTTGTTTTTGATGATGTGCCTCAAGCTCTTGAGAAA
TGGACTTCTTTAGGCTTCAAGGTATACATATACTCAAGTGGCAGCAGATTGGCACAGAGA
CTTTTGTTTGGTCACACAAAACATGGAGACCTGAGAAATTATCTCTGTGGATTTTTCGAT
ACAGCAGTGGGCAACAAGAGAGAAGCAAAAAGTTACCAAGAAATTACAGCATCATTGGGA
GTAGATAAGCCATCAGATATATTGTTTGTGACAGATGTATATCAAGAAGCGACAGCTGCA
AAGGCAGCAGGTTTGGAAGTGATAATCTCTGTCAGACCAGGAAACGGACCTCTTCCAGAT
AATCACGGGTTCAGGACGATCCGATCATTTTCAGAGATCTAA

Peptide Sequence

PEP ID

XP_016473376.1
PEP Infomation

PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 [Nicotiana tabacum]
Sequence

MATDSQAYLEGDKVKDTKSLIAELCRHFYNQGWVGGTGGSITIKVHDESIPKPQQLIVMS
PSGVQKERMVEEDMYVMSSDGSILTAPVAKPPPHKFPKCSDCAPLFMKAYEMRNAGAVIH
SHGMESCLVTMLNPLAKEFRITHMEMIKGIQGHGYYDELVVPIIENTAYERELTESLAEA
IKAYPKTTAVLVRNHGIYVWGDSWISAKTQAECYHYLFDAAIKLHQLGLDWTTPAHGPIH
NPNGHFDGIQNAKISAKEGTLASNGSIKSSRRCIVLDIEGTTTPITFVTDVLFPYARDNV
GRHLDATYGSAETQQDIKLLRAQVQQDLENGVAGAVHIPSDDAGKMEVTEALVANVEAMI
KADRKITALKELQGHIWQTGFENNELEGLVFDDVPQALEKWTSLGFKVYIYSSGSRLAQR
LLFGHTKHGDLRNYLCGFFDTAVGNKREAKSYQEITASLGVDKPSDILFVTDVYQEATAA
KAAGLEVIISVRPGNGPLPDNHGFRTIRSFSEI

Transcript Sequence

Gene sequence data has not been registered.